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Remove some old logic in the arm, x86, hc, and sh linker scripts that was kicked off when CONFIG_BOOT_RUNFROMFLASH=y.

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configure.sh:  Don't append the apps directory path setting if the correct setting is already in defined in the defconfig file.

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Oops.. sendfile() was not keeping track of the number bytes transferred or handling partial writes correctly.

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Kconfig changes + back out part of last check-in:  The 2STOP setting must be integer 0/1, not boolean

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